Butternut Squash Muffins (Gluten-Free)

These Chocolate Chip Butternut Squash Muffins are made with bananas, squash, and whole-grain oats. They bake up tender, delicious, and full of flavor. They're a healthy, gluten-free treat everyone loves!

I've fallen in love with a new muffin. Chocolate Chip Muffins with Butternut Squash! I knew when I tasted the batter they were gonna be terribly good. They're wholesome and hearty you don't even know they have a veggie stashed in them. Sneaky.

I'm not sure I could ever pick a favorite muffin although banana bread muffins still have a piece of my heart. I guess I can have multiple loves, but for right now these Chocolate Chip Butternut Squash Muffins are my love muffins. Hope you love it!

Why You Will Love Butternut Squash Chocolate Chip Muffins

• Healthy Muffins. The main ingredient in this muffin recipe is butternut squash which is high in vitamin A, vitamin C, magnesium, and potassium. These muffins are also dairy-free, gluten-free, and nut-free.
• Quick and Easy to Make: Mixing the muffins takes just minutes of active time.
• Versatile Baked Good: Enjoy these muffins for breakfast, brunch, or as a healthy butternut squash dessert.

Ingredients

Let's take a look at the main ingredients you will need to gather to make these gluten-free muffins with butternut squash and chocolate chips.

• Bananas: For best results make sure they are very ripe. The riper the bananas the more sweetness they add as well they're easier to mash.
• Butternut squash puree: I use canned squash puree to save time but you can make your own my cooking butternut squash and mashing it.
• Egg whites: I like using egg whites as the binder for this easy recipe. You can also use a whole egg if you prefer.
• Coconut oil: Keeps your healthy butternut squash muffins moist and tender.
• Maple syrup: Adds a bit of sweetness that's less processed than using granulated sugar.
• Spices: These chocolate chip butternut squash muffins are flavored with cinnamon, ginger, and nutmeg.
• Baking soda: Gives your blender muffins a bit of lift.
• Flour: This recipe uses a combination of gluten-free baking flour such as the 1-to-1 flour by Bob's Red Mill and gluten-free oat flour.
• Rolled Oats: Make sure you choose gluten-free oats as not all oatmeal is gluten-free.
• Mini chocolate chips: Choose non-dairy chocolate chips such as Enjoy Life to keep this recipe dairy-free.

How to Make Butternut Squash Muffins

Mixing these muffins takes just minutes. Here's a look at the main steps you will take to make them. Be sure to check the recipe card for the full details.

1. Combine the bananas, egg whites, coconut oil, maple syrup, and butternut squash in a food processor or blender. Process or blend until the wet ingredients are smooth.
2. Add both types of flour, cinnamon, ginger, nutmeg, and salt to the food processor or blender. Process again until the mixture is smooth. 

3. Transfer the ingredients to a mixing bowl. Add the oats and chocolate chips to the bowl and fold them into the batter. 
4. Spoon the batter into the muffin pan openings filling each only three-quarters full.

5. Bake the muffins for 15 minutes. Remove the pan from the oven and cool for 5 minutes in the pan. Transfer the muffins to a baking rack to finish cooling.

How to Store

• Store: Store your baked muffins in an airtight container in the fridge for up to a week. If you want to enjoy it warm, you can pop it in the microwave for a few seconds.
• Freeze: To extend their shelf-life place them in a freezer-safe container and store them for up to two months.

Expert Tips

• Transfer your muffins to a cooling rack after cooling for five minutes in the pan after removing them from the oven. This will prevent tough or overcooked muffins.
• Don't like chocolate chips? You can swap them for dried cranberries or raisins instead.
• Use muffin liners or spray your pan well. Both of these options are ideal to prevent sticking.
• Sprinkle some chocolate chips on top of the muffins right before baking if you want the chocolate chips more visible.
• Make sure you measure your flour properly to avoid tough or dry muffins.

Recipe FAQs

More Gluten-Free Muffin Recipes

If you tried this Butternut Squash Muffins or any other recipe on my website, please please leave a 🌟 star rating and let me know how you go in the 📝 comments below.

Healthy Butternut Squash Muffins with Chocolate Chips

Megan Olson

A simple wholesome chocolate chip muffin turned healthy. These Chocolate Chip Butternut Squash Muffins are gluten free and loved by all!

5 from 2 votes

Print Recipe Pin Recipe

Prep Time 10 minutes mins

Cook Time 15 minutes mins

Rest Time 20 minutes mins

Total Time 45 minutes mins

Course Breakfast, Snack

Cuisine American

Servings 15 muffins

Calories 203 kcal

Ingredients

 

US CustomaryMetric

 

1x2x3x

• ▢ 2 bananas very ripe, mashed
• ▢ ½ cup butternut squash puree
• ▢ 2 egg whites
• ▢ ½ cup coconut oil melted
• ▢ ½ cup maple syrup
• ▢ ½ teaspoon cinnamon
• ▢ ¼ teaspoon ginger
• ▢ ⅛ teaspoon nutmeg
• ▢ ½ teaspoon sea salt
• ▢ 1 teaspoon baking soda
• ▢ 1 cup Gluten Free 1:1 Baking Flour
• ▢ ⅔ cup Gluten Free Oat Flour
• ▢ ¾ cup Gluten Free Rolled Oats
• ▢ ½ cup mini chocolate chips dairy free

Instructions

 

• Preheat oven 375 F. Prepare a muffin tin with cooking spray.
• In a food processor or blender, add bananas, egg whites, coconut oil, maple syrup and butternut squash. Process until wet ingredients are smooth.
• Next add the 2 flours, cinnamon, ginger, nutmeg and salt to the food processor or blender. Process until smooth. 
• Transfer the ingredients to a mixing bowl. Add the oats and chocolate chips and fold into the batter. 
• Spoon the batter into the muffin cavities 3/4 of the way full. 
• Bake 15 minutes. Remove from the oven and cool in the pan 5 minute before transferring to a baking rack to cool another 15 minutes before eating. 
• Store muffins in the refrigerator up to 1 week or freezer up to 60 days. 

Notes

• My Amazon shop has more products similar to those used for this recipe and that I recommend to my nutrition clients.
• Transfer your muffins to a cooling rack after cooling for five minutes in the pan after removing them from the oven. This will prevent tough or overcooked muffins.
• Don't like chocolate chips? You can swap them for dried cranberries or raisins instead.
• Use muffin liners or spray your pan well. Both of these options are ideal to prevent sticking.
• Sprinkle some chocolate chips on top of the muffins right before baking if you want the chocolate chips more visible.
• Make sure you measure your flour properly to avoid tough or dry muffins.

Nutrition

Serving: 1muffinCalories: 203kcalCarbohydrates: 27gProtein: 3gFat: 9gSaturated Fat: 7gSodium: 174mgPotassium: 137mgFiber: 2gSugar: 12gVitamin A: 520IUVitamin C: 2.3mgCalcium: 33mgIron: 0.8mg

Tried this Recipe? Let me know!Let us know how it was!

This post was originally published in February 2015. It has been re-tested and updated with new photos!

About Megan

Megan is a certified nutrition practitioner, author, freelance food photographer and fitness instructor living in Phoenix, Arizona. On her blog, Skinny Fitalicious she shares EASY, gluten free recipes for weight loss. Follow Megan on Facebook, Twitter, Pinterest and Instagram for the latest updates.